Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886624.1_cds_XP_016440738.1_36168
CDS Infomation

[gene=LOC107766474] [db_xref=GeneID:107766474] [protein=translation initiation factor eIF-2B subunit delta-like isoform X1] [protein_id=XP_016440738.1] [location=join(8671..9145,9246..9368,10975..11339,12211..12955,13104..13200,13290..13344,13459..13521)] [gbkey=CDS]
Sequence

ATGGACTCTCGCCGAGTTCCTCGAACCGTAAGCGACCCTAAGGTTCGTCAAGTCGGGTTC
TTCGCTCCACCCGACCGTTCCCAATCGGGTCCTAACATCCAATTTTCTTCTTCTCCTCCA
GTTTCCGATCTATCCCCTTCTGGTAACTCTCTTTCCCCCGTTATGATCCCTCCTCCACGT
CATCTCTCCGCCGACTTATCCCTACCCCGTCCCCCTCAGGCACCGTTATCCCCGCTGCGC
CGTGATTCTATCCCCGTCGGCAGCTACAATCCCTCTGAATTCTCTTCTCCTACTACCACT
GACTTCCCGGCTGATGATTCATCCTCTCCTGGCTGGCATCGCCGGGGTAGTTCTGGAAAA
TTTGCTACTTCTCTTCCCTCCGCAGGATTTGAAATGCCTGCCGCCAAGCAGAACAGCTTT
ACGGTCTCTAGGTTGACTACTGTCTCCAAGGCTAACGTGCCTTTAGGAGTAACAGATAAG
GATGGGGAAGTGCAGAAAGAACGAACTGCTAGTTCAAAACCATTGAAAGAGAAAACAACC
AAGGCCGAGAGGCGTGCTCTTCAGGAAGCTCAAAGAGCTGCAAAAGCTGCTGCTAAAGCT
GACGGAACTAAGACCGCCACTGCTGCTTCTGGAGATCTTAAATCATCAAATTTAAACCCA
GTAAAGATTGCCAAGGGCACTTCACAAAAGAAAGAAAGCCCTCCTGTTGCAACTACTGAA
AAAAAGGGCAGTGATCGTGCAACAGATAAAGATAGGAAAAAAGATGTTCCTCATCCACGG
ATGCAATTTGATGATAAGAGTCGTGTGGAAAAGGCGAAGAAGCGCTCAGTAGTAAAGCAA
ACTGAAGCCAAAAACAGGGTTGAACTTTTTAGGCATTTGCCTCAATATGAACATGGAACA
AGACTTCCCGAGCTTGAATCAAGATTCTTCCAACTAGATCCAGTTCATCCTGCTGTTTTT
AAGGTTGGGCTGAGATATTTGGCTGGAGATATATCTGGTGGGAATGCCCGCTGTATTGCT
ATGCTTCAAGCTTTTCAAGAGTCCATCAAAGACTACTCAACACCCCCAGAGAAAGCTCTT
ATAAGAGACTTGACTGCAAAAGTTAATTGTTATGTTTCATTTTTGATCGAGTGCAGGCCC
CTCTCAATCAGCATGGGGAATGCTATTAGGTTTCTTAAAACTAGGATTGCCAAATTGCCT
TTGACTTTGTCAGAATCAGAAGCTAAAGCCATTCTTCTGACAGATATTGATCGCTTCATT
AGTGAAAAGATAATACTTGCAGACAAGGTGATAGTCAAGCATGCAGTAACTAAAATAAGG
GATGGTGATGTTCTTCTCACATATGGATCATCCTCTGCTGTTGAAATGATTTTGTTACAT
GCTCATGAGCTTGGCAAGGATTTCCGTGTCGTAGTAGTAGACGCACGTCCAAAGCTTGAA
GGGCGATTACTGCTTCGTCGGTTGGTCGGGAAGGGGGTTAAGTGTACATACACTCATATA
AATGCCATTTCTTATATCATGCATGAAGTTACTAGAGTACTTTTAGGTGCTTCATCAGTT
TTGTCCAATGGAACTGTTTATTCAAGGGTTGGAACTGCAAGCGTTGCTATGGTTGCTAAT
TCATTCCGGGTACCTGTCTTGATATGTTGTGAAGCGTATAAATTTCATGAAAGGGTTCAA
CTTGACTCAATTTGCTCTAATGAACTTGGTGATCCAGAAGCTATAGCTAAGGTTCCCGGT
AGAATGGAAATTAACCACTTGGATGGTTGGTCTAACAGTGATAATTTACAACTGCTGAAT
CTGATTTACGATGCAACACCTTCAGACTATGTATCAATGATAATCACAGATTATGGCATG
ATCCCTCCTACAAGTGTTCCTGTTATTGTTCGAGAGTATCGCAGAGAATATTTATGGACA
TGA

Peptide Sequence

PEP ID

XP_016440738.1
PEP Infomation

PREDICTED: translation initiation factor eIF-2B subunit delta-like isoform X1 [Nicotiana tabacum]
Sequence

MDSRRVPRTVSDPKVRQVGFFAPPDRSQSGPNIQFSSSPPVSDLSPSGNSLSPVMIPPPR
HLSADLSLPRPPQAPLSPLRRDSIPVGSYNPSEFSSPTTTDFPADDSSSPGWHRRGSSGK
FATSLPSAGFEMPAAKQNSFTVSRLTTVSKANVPLGVTDKDGEVQKERTASSKPLKEKTT
KAERRALQEAQRAAKAAAKADGTKTATAASGDLKSSNLNPVKIAKGTSQKKESPPVATTE
KKGSDRATDKDRKKDVPHPRMQFDDKSRVEKAKKRSVVKQTEAKNRVELFRHLPQYEHGT
RLPELESRFFQLDPVHPAVFKVGLRYLAGDISGGNARCIAMLQAFQESIKDYSTPPEKAL
IRDLTAKVNCYVSFLIECRPLSISMGNAIRFLKTRIAKLPLTLSESEAKAILLTDIDRFI
SEKIILADKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKDFRVVVVDARPKLE
GRLLLRRLVGKGVKCTYTHINAISYIMHEVTRVLLGASSVLSNGTVYSRVGTASVAMVAN
SFRVPVLICCEAYKFHERVQLDSICSNELGDPEAIAKVPGRMEINHLDGWSNSDNLQLLN
LIYDATPSDYVSMIITDYGMIPPTSVPVIVREYRREYLWT

Transcript Sequence

Gene sequence data has not been registered.